Journal: The Journal of Neuroscience

Article Title: Intraneural Injection of ATP Stimulates Regeneration of Primary Sensory Axons in the Spinal Cord

doi: 10.1523/JNEUROSCI.1660-17.2017

Figure Lengend Snippet: Antibodies used

Article Snippet: GAP43 , 1:10,000 , Atlas Antibodies , HPA015600 , AB_1234436.

Techniques:

Journal: The Journal of Cell Biology

Article Title: Ral GTPases regulate neurite branching through GAP-43 and the exocyst complex

doi: 10.1083/jcb.200507061

Figure Lengend Snippet: Ral regulates GAP-43 phosphorylation. (A) COS cells were transfected with the indicated myc-tagged Ral constructs and cGAP-43. Levels of phospho-cGAP-43 in cell extracts were determined by immunoblotting with an anti–phospho-GAP-43 antibody. A representative blot is shown. Inactive Ral causes a significant decrease of cGAP-43 phosphorylation (top band, arrow). (B) Quantitative analysis of phosphorylated cGAP-43 in COS cells transfected with cGAP-43 and the indicated Ral constructs. Shown here are data from four independent experiments (means ± SEM; *, P < 0.01). (C) Cortical neurons were nucleofected with the indicated constructs and lysed after overnight expression. Levels of total and phosphoendogenous GAP-43 were then assessed by immunoblotting. The fourth, fifth, and sixth lanes were derived from the same blot. (D) Quantitative analysis of endogenous GAP-43 phosphorylation in cortical neurons after nucleofection with the indicated Ral mutant isoforms. Data were derived from four independent experiments (means ± SEM; **, P < 0.005).

Article Snippet: Antibodies used were mouse anti-RalA, rabbit anti-RalB (BD Biosciences), mouse anti–GAP-43 (Autogen Bioclear), rabbit anti–phospho(Ser41)-GAP-43 (Zymed Laboratories), rat anti–α-tubulin (Harlan), rat anti-HA (Roche), mouse anti-myc (clone 9E10), rabbit anti-myc (Research Diagnostics, Inc.), mouse anti–βIII tubulin (Sigma-Aldrich), and rabbit anti-p38 (Santa Cruz Biotechnology, Inc.).

Techniques: Transfection, Construct, Western Blot, Expressing, Derivative Assay, Mutagenesis

Journal: The Journal of Cell Biology

Article Title: Ral GTPases regulate neurite branching through GAP-43 and the exocyst complex

doi: 10.1083/jcb.200507061

Figure Lengend Snippet: GAP-43 acts downstream of Ral. (A) Constitutively active Ral increases branching in neurons plated on laminin (top middle and right) compared with EGFP-F–expressing cells (top left). This effect is reduced by coexpression of cGAP-43(S42A) (middle and bottom). Shown here are cells stained with anti-myc antibody to detect mutant Ral and anti–cGAP-43. Bar, 100 μm. (B) Quantitative analysis of branching in cells injected with single Ral isoforms or with Ral and cGAP-43(S42A) (means ± SEM: GFP, 3.30 ± 0.18; RalA72L, 8.43 ± 0.97; RalA72L + cGAP-43(S42A), 3.55 ± 0.44; RalB23V, 8.88 ± 0.85; RalB23V + cGAP-43(S42A), 4.29 ± 0.41; *, P < 0.02; **, P < 0.0001).

Article Snippet: Antibodies used were mouse anti-RalA, rabbit anti-RalB (BD Biosciences), mouse anti–GAP-43 (Autogen Bioclear), rabbit anti–phospho(Ser41)-GAP-43 (Zymed Laboratories), rat anti–α-tubulin (Harlan), rat anti-HA (Roche), mouse anti-myc (clone 9E10), rabbit anti-myc (Research Diagnostics, Inc.), mouse anti–βIII tubulin (Sigma-Aldrich), and rabbit anti-p38 (Santa Cruz Biotechnology, Inc.).

Techniques: Expressing, Staining, Mutagenesis, Injection

Journal: The Journal of Cell Biology

Article Title: Ral GTPases regulate neurite branching through GAP-43 and the exocyst complex

doi: 10.1083/jcb.200507061

Figure Lengend Snippet: GAP-43 acts downstream of Ral. (A) A phosphomimetic GAP-43 protein, cGAP-43(S42D), restores branching in neurons plated on laminin and expressing dominant-negative Ral. Shown here are neurons expressing EGFP-F (top left), RalA28N (top middle), or RalB28N (bottom left) and RalA28N or RalB28N and cGAP-43(S42D) (right). Cells are stained with an anti-myc antibody to detect mutant Ral and an anti–cGAP-43 antibody. Bar, 50 μm. (B) Quantitative analysis of branching in cells plated on laminin and injected with single Ral isoforms or with Ral and cGAP-43(S42D) (means ± SEM: GFP, 3.47 ± 0.37; RalA28N, 1.74 ± 0.52; RalA28N + cGAP-43(S42D), 2.42 ± 0.31; RalB28N, 1.56 ± 0.41; RalB28N + cGAP-43(S42D), 3.72 ± 0.35; *, P < 0.04; **, P < 0.001). (C) SCG neurons were plated on polyornithine, microinjected, and left to express the indicated proteins for 5 h before laminin addition. Expression of dominant-negative Ral decreases branching compared with EGFP-F–expressing cells (top, compare middle and right with left). Branching is restored in cells coexpressing cGAP-43(S42D) (middle and bottom rows). Bar, 100 μm. (D) Quantitative analysis of branching in neurons initially plated on polyornithine and injected with single Ral isoforms or with Ral and cGAP-43(S42A) before laminin addition (means ± SEM: GFP, 2.64 ± 0.35; RalA28N, 1.05 ± 0.32; RalA28N + cGAP-43(S42D), 1.82 ± 0.40; RalB28N, 1.74 ± 0.30; RalB28N + cGAP-43(S42D), 2.73 ± 0.45; **, P < 0.01).

Article Snippet: Antibodies used were mouse anti-RalA, rabbit anti-RalB (BD Biosciences), mouse anti–GAP-43 (Autogen Bioclear), rabbit anti–phospho(Ser41)-GAP-43 (Zymed Laboratories), rat anti–α-tubulin (Harlan), rat anti-HA (Roche), mouse anti-myc (clone 9E10), rabbit anti-myc (Research Diagnostics, Inc.), mouse anti–βIII tubulin (Sigma-Aldrich), and rabbit anti-p38 (Santa Cruz Biotechnology, Inc.).

Techniques: Expressing, Dominant Negative Mutation, Staining, Mutagenesis, Injection

Journal: Scientific Reports

Article Title: The BEACH Protein LRBA Promotes the Localization of the Heterotrimeric G-protein G olf to Olfactory Cilia

doi: 10.1038/s41598-017-08543-4

Figure Lengend Snippet: Histological and subcellular distribution of LRBA in olfactory and vomeronasal tissues. ( A ) LacZ enzyme histochemistry of Lrba/gt gene-trap mice (age, 3 weeks) demonstrates expression of the LRBA gene throughout the OE (top). Larger magnification (middle) shows that the staining is predominantly localized to the OSNs. Respiratory epithelium (RE, bottom) is also stained, though weaker than OE. ( B ) β-galactosidase staining was also seen in VNO neuron somata and the microvillar layer of Lrba/gt mice (top, middle), and confirmed by LRBA-IF of adult WT tissue (bottom; SE, sensory epithelium; L, lumen). Scale bars in A , B : overviews 100 µm, close-ups 25 µm. ( C ) LacZ staining of the olfactory bulb required longer incubation (16 h) than of the OE and VNO (2 h). Scale bar in C : 100 µm. ( D – K ) Triple immunostaining for LRBA ( D , H ), OMP ( E , I ), GAP43 ( F , J ) and merged images ( G , K ) in different regions of the adult mouse OE of low ( D – G ) or high ( H–K ) thickness. LRBA-immunoreactivity (ir) is found in the apical somatic cytoplasm and in dendrites as well as dendritic knobs of virtually all OMP-ir mature OSNs. Large and small arrows point to select LRBA-/OMP-ir cell bodies/dendrites and dendritic knobs, respectively, but LRBA is lacking in the OMP-ir ciliary layer (small arrowheads in D – G ). GAP43-ir immature neurons contain no (large arrowheads in D – G ) or only small amounts (double arrows in D – K ) of LRBA-immunoreactivity in the apical cytoplasm of their cell bodies and in dendritic knobs. Scale bar in K for D – K : 10 µm. OE strata are designated in panels G and K: cl, cilial layer; scl, sustentacular cell layer; osnl, OSN layer.

Article Snippet: Antibodies used were rabbit anti-mLRBA-B (1:100), goat anti-OMP (1:300; Wako) as a marker for mature OSNs , and mouse anti-GAP43 (1:300; MerckMillipore) as a marker for immature OSNs , .

Techniques: Expressing, Staining, Incubation, Triple Immunostaining

Journal: Frontiers in Bioengineering and Biotechnology

Article Title: Spatial and temporal gene expression patterns during early human odontogenesis process

doi: 10.3389/fbioe.2024.1437426

Figure Lengend Snippet: Temporal transcriptional changes between DM-cap and DM-bell. (A) Heatmap for DEGs identified in DM-cap and DM-bell. (B) Representative immunofluorescence staining images of GAP43 in DM-cap and DM-bell. The white line outlines dental epithelium. DE: dental epithelium. Scale bar: 50 μm (Cap stage), and 100 μm (Early bell stage). (C) GO analysis for DEGs upregulated in DM-cap. (D,G) KEGG pathway analysis for DEGs upregulated in DM-cap. (E) GO analysis for DEGs upregulated in DM-bell. (F,H) KEGG pathway analysis for DEGs upregulated in DM-bell.

Article Snippet: Primary antibodies, including VEGF (abcam), CD31 (abcam), GAP43 (zenbio), and Tubulin β III (abcam), were diluted into 1:100 and incubated overnight at 4°C.

Techniques: Immunofluorescence, Staining